Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905583.1_cds_XP_016455833.1_49725
CDS Infomation

[gene=LOC107779850] [db_xref=GeneID:107779850] [protein=zinc finger MYM-type protein 1-like] [protein_id=XP_016455833.1] [location=complement(join(27193..27411,27528..27580,27630..28226,28289..28775,29106..29169,31109..31179,40935..41043,53695..53876))] [gbkey=CDS]
Sequence

ATGTGCGAGATTAGAGCCAAAACGAAGGAAAATGAAAATTTTGATTTTCAGCGCCACATG
AAGCGCTCCACGCCACCTGTGCCGCCAGAGGCAGAATGCTCAATAAGCCAGTGCCTGGGC
CAACGTGGGGCGCTTGGCTGGATGCTGGTGAAAAGAAATTTGTCCAAGTTTGCTGAGACA
AGTTCTATTGGGGTTTCATGGTGGATGTCGAGCAGGAAGAGTGATTGGATATTGCTCGGT
GAATTGCTTGGTGAATGGCGTATCGGTTACGTCCTTTCGGGTTATTGTGGTATTCAGGCA
TCACAGAGTCCGCTCCCGAGTGATGATTCTCCCAGTTCAGGTAGTGATTCAGAGATTACG
AGGTTATTAGCATCAGTTTGTGCGATTGATGAATATATCCTCATTGGCTCATTTCTTCAA
AAATTTAGGGACACATTTCTTTCTGATCTTGATTTAGAATCTCTCAACGCTGATCCAGGA
GATAGAAAGCCTATTACAGAATACAACCCTAATATACGTGATGAAGTTAGAAGACATTAT
ATTCAAAAAAAGCCTTGTCAGCTAGCGAATCATGATTTTCCTAAAACTAAGTTTGGGAAG
ATAATGAGTCAGTTTTGTCCTGGTTGGTTTAAGGGTCAACATTCTAAGTGGTTGGAGTAC
AATATATCAAAAGATGCTGCATATTGTTTGTGTTGTTATTTGTTCAAAAATGAACATGAA
ATTCATGGAAATACGGGAGATGCTTTTACAAAGAATGACTTTAAAGCTTGGAACAAGGCT
ATTGAAAGATTTAAAGCTCATGTTGGAGAAGTAAATAGCATCTACAACAAGTGTTTCAAT
AGGATTCTTGATTTAAAGAATCAATCACAATCAATTCGCACTTCTTTTGACAAACAATCT
GAGAAAGAAAAAAGTTTGCCATTTCGTGGGCATGATGAGAGTCAATCTTCTACAAATAGA
GGTATTTTTCTTGAGCTTTTGCAATGGTATGGGGATATTGATCGGGATGTTGGAAGCATT
ATATTAGAAAATTCTCCAAGAAATGAAATGATGTATTCTCCAAGTATTCAAAAAGATATT
GTTGATGCTTGTGCCAAAGAAACAGTCAAAGCTATCATTGAAGACATGAATGGGGATTTT
TTCGGGATATTAGTTGATGAATCAAAAGATATATCACACAAGGAGCAAATGGCACTTGTT
TTGAGATATGTTAACAACAAAGGTGAAGTCATAGAGACATTTGTTGGTATTGTTCATGTT
AGTAATACATCGGCTATGTCATTGAAAAAGGAAATCTGCTCTTTTCTTTCTGATCACTCA
TTAAGTCCAACGCAAATACGTGGGCAAGGTTATGATGGGGCTAGTAACATGCAGGGAGAG
CTAAATGGTGTTAAGACTTTAATTTTCAATGAGTCTCCATCAGCATATTGCATTCACTAT
TTCGGTCACCAATTGCAATTAACACTTGTGGCTATTGCAAAGAAGCATTCAGATGTAGAT
GACTTTTTTTGGATTTGCTTCGAGAACATCAAGCTGAAAGGTTATAAGATTTGCTCAAAT
CAGATTATTCATGTTCTTGAATTTACTGCACGTGAGTGTCCAAACTATGCTGACAGAATT
GTTGCTGAAAGTCTTATGGGTAAGATTAAGGAATTTGATTTTGCTTTTATGTTGCACTTG
ATGCTAAATGTTTTAACAATGACAAATGAGTTGAGTTGTGCGTTACAAAGGATGGATCAA
GATATTGTCAATGCTATGGGACTTCTTGCTCTTACAAAGTAA

Peptide Sequence

PEP ID

XP_016455833.1
PEP Infomation

PREDICTED: zinc finger MYM-type protein 1-like [Nicotiana tabacum]
Sequence

MCEIRAKTKENENFDFQRHMKRSTPPVPPEAECSISQCLGQRGALGWMLVKRNLSKFAET
SSIGVSWWMSSRKSDWILLGELLGEWRIGYVLSGYCGIQASQSPLPSDDSPSSGSDSEIT
RLLASVCAIDEYILIGSFLQKFRDTFLSDLDLESLNADPGDRKPITEYNPNIRDEVRRHY
IQKKPCQLANHDFPKTKFGKIMSQFCPGWFKGQHSKWLEYNISKDAAYCLCCYLFKNEHE
IHGNTGDAFTKNDFKAWNKAIERFKAHVGEVNSIYNKCFNRILDLKNQSQSIRTSFDKQS
EKEKSLPFRGHDESQSSTNRGIFLELLQWYGDIDRDVGSIILENSPRNEMMYSPSIQKDI
VDACAKETVKAIIEDMNGDFFGILVDESKDISHKEQMALVLRYVNNKGEVIETFVGIVHV
SNTSAMSLKKEICSFLSDHSLSPTQIRGQGYDGASNMQGELNGVKTLIFNESPSAYCIHY
FGHQLQLTLVAIAKKHSDVDDFFWICFENIKLKGYKICSNQIIHVLEFTARECPNYADRI
VAESLMGKIKEFDFAFMLHLMLNVLTMTNELSCALQRMDQDIVNAMGLLALTK

Transcript Sequence

Gene sequence data has not been registered.